Preheat the oven to 350 degrees. Line a 12-cup cupcake/muffin tin with cupcake liners and lightly spray the liners with non-stick spray.
Melt the oil and chocolate together in the microwave, heating in 30-second increments, and stirring between increments each time. Whisk mixture until completely smooth. Set aside to cool.
In a medium sized bowl combine the flour, baking soda, baking powder, cocoa powder, and salt; stir together until thoroughly combined and set aside.
In a large bowl, whisk together the eggs, sugars, and vanilla; beat until smooth. Add the cooled oil/chocolate mixture and whisk until smooth. Add half of the flour mixture, then half of the Greek yogurt and the applesauce. Repeat the process until everything is added, and be sure to mix until combined - then quickly stir in the coffee *Don't over mix.
Divide the batter among the 12 liners in your prepared pan. Bake for 16-18 minutes.
When cool frost with your favorite for frosting and add crushed Oreo cereal to look like coal!